FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19050666
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC345330.18126925326390164No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA247490.1299114687119075No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG223940.11754969616285331No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG220670.11583322073884451No Hit
GTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAGT217510.11417448607833448No Hit
GTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGA196880.10334546834215666No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)