FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925589

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925589
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19054327
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTACCTTTGCACGGTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGG636730.33416556774742034No Hit
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA598820.3142698243816221No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG485720.25491322784583265No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA415280.2179452467673091No Hit
CTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGT291760.15312007608560513No Hit
CTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTT287900.15109428950180187No Hit
CTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAAC258950.13590089012327752No Hit
CACCCGTTTACCTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAA255550.13411651852096376No Hit
GTGACGATGACGTTGTAGATGTGGTCGTTACCTAGAAGGTTGCCTGGCTG238880.12536784951785493No Hit
CCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC212110.11131854722551997No Hit
CTCCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGG206360.10830085995690113No Hit
CTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCTATTGCGCC193550.10157797753759554No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)