FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925696

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925696
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24236204
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT857790.3539291879206826No Hit
CGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGATCCGGGG811550.33485029256231713No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG439030.1811463544373533No Hit
CGAGAACTGTCGCCCTTCCACGATGTGGCTCCGTGCCTTTATCCTGGCCA247910.10228912085407435No Hit
CAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGCTGC245310.10121634559603476No Hit

[WARN]Adapter Content

Adapter graph