FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925767

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925767
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13657963
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA275160.20146488901749113No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG230590.16883191146439627No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA193090.14137540129520046No Hit
CTCCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGG182620.133709543655961No Hit
GTCGTTACCTAGAAGGTTGCCTGGCTGGCCCAGCTCGGCTCGAATAAGGA159030.11643756832552556No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)