FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925776

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925776
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17126518
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTT332520.19415505241637557No Hit
GACAAATCAAGAAACAAACTGCACTTGTTGAGCTTGTGAAACACAAGCCC294450.1719263658847642No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA265470.15500523807583072No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT254410.14854741635164836No Hit
CCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTT242650.14168087173353044No Hit
GGAGAGACAAATCAAGAAACAAACTGCACTTGTTGAGCTTGTGAAACACA210200.12273364615037335No Hit
GACCAACCAAGATGAGTGCCCTGGGAGCTGTCATTGCCCTCCTGCTCTGG202970.11851212254586718No Hit
AGGAGAGACAAATCAAGAAACAAACTGCACTTGTTGAGCTTGTGAAACAC173020.10102462158390864No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)