FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925813

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925813
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17398972
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA356880.20511556659784266No Hit
ACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCT281810.1619693393379793No Hit
GGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTGACTT249930.14364641773088663No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)