FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925851

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925851
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20331989
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC307690.15133295616085568No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC299400.1472556374096012No Hit
AGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAG298300.1467146180336808No Hit
GGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGC277540.1365041069026744No Hit
CAAGGATTCAGAGTGCCCCTCCGGCCTCGCCATGAGGCTCTTCCTGTCGC255820.12582143340722837No Hit
CAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGCTGC248820.12237858283318961No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA247850.1219015021107871No Hit
GACAAATCAAGAAACAAACTGCACTTGTTGAGCTTGTGAAACACAAGCCC219070.10774646789352482No Hit
GTGAAGGACGTCCTTCCCCAGGAGCCGACTGGCCAATCACAGGCAGGAAG214230.10536598263947516No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)