FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925856

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925856
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16642808
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTACCTTTGCACGGTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGG643390.38658740760573573No Hit
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA428510.257474580010777No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG381880.22945647152812196No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA326630.19625894861011436No Hit
GTGACGATGACGTTGTAGATGTGGTCGTTACCTAGAAGGTTGCCTGGCTG219380.13181669823986433No Hit
CTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAAC203020.12198662629527421No Hit
CTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTT193150.11605613668078127No Hit
CTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGT185900.1116999006417667No Hit
CTCCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGG171430.10300545436803693No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)