FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925899

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925899
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22479126
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGAGGTCCCCCACGGCCCTTCAGGATGAAAGCTGCGGTGCTGACCTTGG383230.1704826068415649No Hit
AGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAG319210.14200285189023806No Hit
GGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGC275660.12262932286602247No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT264670.11774034275176001No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA260460.11586749413656028No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)