FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925934

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925934
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22920098
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT1561250.6811707349593357No Hit
AGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAG1071160.4673452966911398No Hit
GGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGC799430.34878995718081135No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG647660.2825729628206651No Hit
CAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGCTGC420750.18357251352066645No Hit
CAAGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGA396500.17299227952690255No Hit
CCTAGAGGCAGCTGCTCCAGGAACAGAGGTGCCATGCAGCCCCGGGTACT391980.17102021117012678No Hit
CTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTC302800.13211112797161687No Hit
CAAGGATTCAGAGTGCCCCTCCGGCCTCGCCATGAGGCTCTTCCTGTCGC299340.13060153582240355No Hit
GTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCA263140.11480753703583642No Hit
AGCAAGGATTCAGAGTGCCCCTCCGGCCTCGCCATGAGGCTCTTCCTGTC251300.1096417650570255No Hit
GACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGCT244670.106749107268215No Hit
GTCGGAGGTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACG243550.10626045316211126No Hit
CTCATTCTTGGCAGGATGGCTTCTCATCGTCTGCTCCTCCTCTGCCTTGC235000.10253010261998008No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)