FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004926007

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004926007
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24585475
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAG406470.16532932554689303No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA401150.16316544626451188No Hit
CCTAGAGGCAGCTGCTCCAGGAACAGAGGTGCCATGCAGCCCCGGGTACT373540.15193523818433446No Hit
AGGAGGTCCCCCACGGCCCTTCAGGATGAAAGCTGCGGTGCTGACCTTGG369900.1504546892016526No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC348650.14181137439890829No Hit
GGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGC305350.12419934941261049No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG302390.12299538650361647No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)