EGAF00004926035 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004926035
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12368107
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTAC	26146	0.21139855921362907	No Hit
CGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGATCCGGGG	25614	0.20709717339929223	No Hit
CATGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCC	23759	0.19209892023088093	No Hit
CCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTAC	21306	0.17226565067718125	No Hit
CACAGCATGGACATGAGAGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCT	16973	0.13723199516304316	No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT	16962	0.1371430567345512	No Hit
GTCAGGACACAGCATGGACATGAGAGTCCTCGCTCAGCTCCTGGGGCTCC	16042	0.12970456998795368	No Hit
CAGGAGGCAGCGCTCTCAGGACGTCACCACCATGGCCTGGGCTCTGCTCC	15958	0.12902540380674263	No Hit
GTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCC	15210	0.12297759066929159	No Hit
GGACACAGCATGGACATGAGAGTCCTCGCTCAGCTCCTGGGGCTCCTGCT	13993	0.11313776635341205	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGATTT	5110	37.84718	94
TCACCCG	5505	37.15891	3
GGACCTC	16785	35.64483	4
CGCGGGT	8545	35.49697	1
GCGGGTC	9085	35.220455	2
ATGGACC	9045	34.80563	2
ACCCGGC	5940	34.519737	5
CACCCGG	6130	33.375954	4
GGAGTCG	19925	32.676483	94
ACCTCCT	18420	32.484333	6
AGCGCTC	6525	32.219532	9
GACCTCC	19205	31.17517	5
CGGGTCT	10525	30.13411	3
TGCAACC	10660	29.54762	94
TGGACCT	20545	29.070738	3
GTCTGTC	11200	28.409597	6
GTCAGGA	14035	28.159683	1
GCGAACG	685	28.08194	3
GGTCTGT	11780	27.244778	5
CAGCGCT	7830	26.550379	8