FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004926056

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004926056
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16800893
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTACCTTTGCACGGTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGG653380.3888959949926471No Hit
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA433440.2579862868003504No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG394030.23452920032286378No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA335380.19962034160922282No Hit
GTGACGATGACGTTGTAGATGTGGTCGTTACCTAGAAGGTTGCCTGGCTG217340.12936217140362719No Hit
CTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAAC204190.12153520649170256No Hit
CTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTT195280.11623191695822359No Hit
CTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGT191780.11414869435809157No Hit
CTCCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGG171360.10199457850246411No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)