FastQCFastQC Report
Thu 23 Feb 2023
EGAF00004945115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004945115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82684151
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCAAAACTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT1204290.1456494364923696No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1192360.1442065964975561No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG1115170.13487107099884232No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT891080.10776914187581124No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)