FastQCFastQC Report
Mon 4 Jul 2022
EGAF00004945146

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004945146
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95514623
Sequences flagged as poor quality0
Sequence length35-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2180940.2283357177675297No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1602600.1677858268885174No Hit
GGCCAATTGATTTGATGGTAAGGGAGGGATCGTTGACCTCGTCTGTTATG1189260.12451077778949093No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1123740.11765109516267472No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG1101100.11528077747843908No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG990440.10369511692466188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)