FastQCFastQC Report
Fri 10 Feb 2023
EGAF00004945153

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004945153
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101752286
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3138490.30844417588809747No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG1255130.12335152843642254No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT1203460.11827350984527267No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC1100940.10819806053300857No Hit
CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGC1046120.10281046658745338No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA1030660.1012910904036102No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)