FastQCFastQC Report
Fri 27 Jan 2023
EGAF00004945175

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004945175
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125584523
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATAGATCTCGGTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGG2686580.21392604246305097No Hit
ATAGATCTCGCGGTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCG1645480.1310256997193834No Hit
ATAGATCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1635840.1302580892073779No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)