FastQCFastQC Report
Fri 27 May 2022
EGAF00004945184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004945184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences171525837
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12608580.7350834265277482No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5475780.31923936916862267No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2251320.13125252961161765No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1810720.1055654373515752No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)