FastQCFastQC Report
Fri 27 May 2022
EGAF00004945197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004945197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124095240
Sequences flagged as poor quality0
Sequence length35-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGT26185572.110118808747217No Hit
GGGGGATCCTTATCTGTCAAAACCGCTAATGTCCGTTCTAAGACCGTCTG16618171.3391464491305227No Hit
GGGGGATCCTAGAGACCATTCGCGATTCCATGAGACTCCAAGGGTTCTGC6735180.5427428159210619No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC3436050.27688813849749594No Hit
GGGGGATCCGTATACGTTTCTAATTTGTAGTTAACGGTTGGATACCACTT2744580.22116722607571412No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2340860.18863414906164008No Hit
CTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACTATTCCTC2217050.17865713463304475No Hit
ATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGC2177400.1754620080512355No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG2059310.16594592991640938No Hit
CATAAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTAT1987520.16016085709653327No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG1643570.13244424201927488No Hit
GTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAAT1522490.12268721991270577No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT1469730.11843564668556184No Hit
CTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGCTCACACCT1403070.11306396603125149No Hit
CCCAATACCAAACGCCCCTCTTCGTCTGATCCGTCCTAATCACAGCAGTC1395870.1124837665006329No Hit
AAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATC1364330.10994217022345096No Hit
CTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGA1359510.10955375887100909No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA1325490.10681231608883628No Hit
GTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCAT1276430.1028589009538158No Hit
CCAATACCAAACGCCCCTCTTCGTCTGATCCGTCCTAATCACAGCAGTCC1267060.10210383573133024No Hit
AGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCT1253380.10100145662315493No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)