FastQCFastQC Report
Thu 16 Jun 2022
EGAF00004945283

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004945283
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences196895675
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48579492.4672705482230626No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC2966850.15068131892688855No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA2784210.1414053406708908No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG2324650.11806506161194247No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG2111020.1072151534054773No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)