FastQCFastQC Report
Tue 28 Jun 2022
EGAF00004945308

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004945308
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93355698
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2015640.2159096919825933No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1245610.13342624249887777No Hit
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA1230650.13182376934292753No Hit
GTCGTTACCTAGAAGGTTGCCTGGCTGGCCCAGCTCGGCTCGAATAAGGA1001430.10727036714995157No Hit
CTCCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGG999180.10702935347342163No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)