FastQCFastQC Report
Mon 4 Jul 2022
EGAF00004945309

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004945309
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93355698
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7234020.7748878916849832No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG1804770.19332189021820606No Hit
GTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGA1699200.18201352851542069No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA1627370.17431930078868887No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC1601460.1715438944069595No Hit
GTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAGT1164320.12471868615882449No Hit
ATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCG1138300.12193149688624257No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG1002000.10733142394800584No Hit
TGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATT977300.1046856293656548No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)