FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004945369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004945369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35629136
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1173690.3294185971840574No Hit
ATGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTAT500630.14051140617050045No Hit
ATCTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTC493560.13852707514434254No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG475720.13351993716603175No Hit
ATCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTT443950.12460307766093458No Hit
ATCGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGAC417150.1170811439267009No Hit
ATAGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCAC400630.11244448925171802No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)