FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004946560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004946560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16668261
Sequences flagged as poor quality0
Sequence length34
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGTATA35300.010.0081371
GTATAGA13900.08.6738331
ATACCGT3909.094947E-128.6146726
CTAGGAC23050.08.5026783
GTATAAG30200.08.3438063
TAGGACG6700.08.1489474
TGTATAA34750.08.10043052
TAGGACT20400.08.0977344
TAGACTG22850.08.0256915
TCTAGAC20500.07.92141533
AGTACCG6750.07.6735325
TACACCG7500.07.6527935
CTTATAC14900.07.6102243
GTTCTAG24050.07.5780191
GTCGTAA3156.52959E-77.565991
AGGACTG41150.07.5523225
TATACTG18050.07.5230145
TATAAGA36400.07.49971774
CTAGTAC10300.07.4752223
GTGTTAG23650.07.4690751
Produced by FastQC (version 0.11.5)