FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004946572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004946572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5383320
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG160200.2975858763736876No Hit
ACTGTCCACAGGTCCC98890.18369704940445672No Hit
CTGGTGGACGCGGTTC91030.1690963940467964No Hit
GTGGTTAACGGCCTGT80170.14892296946865505No Hit
AAGACAAACAGTACGG68220.1267247720737389No Hit
GTGTACTGACAGTCCG65050.12083621259743058No Hit
AGCTATCGACGGTTTA56750.1054182177540997No Hit
TGTCCCATGGCCAGCT54230.10073709160889563No Hit
GGGTGAATGGACAAAT54040.10038414955826516No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)