FastQCFastQC Report
Fri 9 Sep 2022
EGAF00004946710

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004946710
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7142167
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG216980.30380135328675456No Hit
ACTGTCCACAGGTCCC130880.18324970558655376No Hit
CTGGTGGACGCGGTTC126130.1765990630014672No Hit
GTGGTTAACGGCCTGT108140.15141062929500249No Hit
AAGACAAACAGTACGG92420.1294005026765686No Hit
GTGTACTGACAGTCCG87460.12245583168245715No Hit
AGCTATCGACGGTTTA75200.10529017313652844No Hit
GGGTGAATGGACAAAT75070.10510815554998923No Hit
TGTCCCATGGCCAGCT73510.1029239445115187No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)