FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004946759

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004946759
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13505817
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG418870.3101404380053424No Hit
CCTAGCACTACAGGCA285110.2111016312452627No Hit
CGTTCTCGAATAACCC157970.11696441614750148No Hit
CATTCCTCTACGCGAA153250.11346962571757042No Hit
TCGATGATGTCCCGTT147950.10954539070091057No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)