FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004946804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004946804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3311166
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCGATGGTTAGAA131450.39699006331908454No Hit
GTCGACCGATGCTCAA116770.3526552277958882No Hit
CATTCAACTAGGCATG109590.3309710235004829No Hit
GGGGGGGGGGGGGGGG94410.2851261458954338No Hit
TGTAAGCTGTTGTGAC89430.27008612676018057No Hit
ACTGGGCACTTCTCGC86400.26093527174415293No Hit
GCTTTAGGAACTAGTC80600.24341878359466124No Hit
TAGTTGCGACATAGCT49790.15036999051089556No Hit
CATCAGTGATTCGCAA49270.1487995467457687No Hit
CAGGAGCCTCGTGCAC41380.12497108269413251No Hit
CAGGAGCCTTCCAATG37420.11301154940585884No Hit
NNNNNNNNNNNNNNNN35660.10769620127773721No Hit
TCCTTAAACAGGGAGG34210.10331707924036426No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)