FastQCFastQC Report
Sat 10 Sep 2022
EGAF00004946840

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004946840
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19167244
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATGCTCT1884301698.30842660530644No Hit
TATGCTCA805580.4202899488314544No Hit
AATGCTCT364350.19008992633474064No Hit
TAAGCTCT263920.13769324374437975No Hit
TATGCACT243070.12681531053708087No Hit
TATGCTAT197050.10280559896874061No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)