Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004946843 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19167244 |
Sequences flagged as poor quality | 0 |
Sequence length | 34 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TAGACAG | 3090 | 0.0 | 9.061244 | 5 |
TATACTG | 2145 | 0.0 | 8.941484 | 5 |
TAGACTG | 2565 | 0.0 | 8.51439 | 5 |
TACACTG | 3215 | 0.0 | 8.491218 | 5 |
TAGGACT | 2530 | 0.0 | 8.189546 | 4 |
CTAGGAC | 2790 | 0.0 | 7.978321 | 3 |
CTAATAC | 1885 | 0.0 | 7.946777 | 3 |
CTAGTAC | 1295 | 0.0 | 7.8917212 | 3 |
GTATTAG | 1935 | 0.0 | 7.6693645 | 1 |
CGTATAC | 420 | 4.2200554E-10 | 7.6665006 | 3 |
GTATACG | 440 | 1.4006218E-10 | 7.636477 | 1 |
TAGAACC | 2095 | 0.0 | 7.617973 | 4 |
CTAGAAC | 2955 | 0.0 | 7.580208 | 3 |
ATAGTAC | 1480 | 0.0 | 7.5674033 | 3 |
CCTACAC | 2795 | 0.0 | 7.5633416 | 3 |
TAGGACC | 2095 | 0.0 | 7.5511484 | 4 |
GTATAGG | 1670 | 0.0 | 7.461188 | 1 |
TAGTACA | 1880 | 0.0 | 7.4466467 | 4 |
TATACAG | 2520 | 0.0 | 7.444244 | 5 |
GTATAGA | 1865 | 0.0 | 7.4317455 | 1 |