FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004946847

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004946847
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14764673
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG457610.30993575001627194No Hit
TTATCGACTTTCCATT445750.3019030628040323No Hit
AACTTACCTGAATCTC433440.29356559403652216No Hit
GCTGGACACGCCCTGA188320.12754769441896885No Hit
ATTACCTACCGAGGAT170510.11548511775370846No Hit
CATAGTCGACTACTCC149180.10103847203388791No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)