FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004946873

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004946873
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4787020
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG151560.31660615581301105No Hit
ACTGTCCACAGGTCCC88630.18514650032797023No Hit
CTGGTGGACGCGGTTC84220.17593408843079827No Hit
GTGGTTAACGGCCTGT72220.1508663009555005No Hit
AAGACAAACAGTACGG62730.13104185902711918No Hit
GTGTACTGACAGTCCG58590.12239347234814144No Hit
AGCTATCGACGGTTTA50830.10618296978078219No Hit
TGTCCCATGGCCAGCT49760.10394775873090148No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)