Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004946889 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3842690 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCTGATC | 3763039 | 97.92720724284291 | Illumina PCR Primer Index 9 (100% over 8bp) |
ATCTGATA | 17917 | 0.46626191548108226 | No Hit |
ATATGATC | 9473 | 0.24652001592634326 | No Hit |
ATCAGATC | 8976 | 0.23358636788291537 | Illumina PCR Primer Index 9 (100% over 8bp) |
ATCTGCTC | 6970 | 0.18138335384847593 | No Hit |
ATCTGAAC | 5408 | 0.1407347457119882 | No Hit |
AACTGATC | 5229 | 0.13607655054141762 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)