Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004946959 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17946938 |
Sequences flagged as poor quality | 0 |
Sequence length | 34 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACGAGAC | 1845 | 0.0 | 10.319786 | 22 |
CGAGACA | 1900 | 0.0 | 9.873824 | 23 |
TATACCG | 330 | 1.8189894E-12 | 9.757823 | 5 |
ATCTCCG | 2050 | 0.0 | 9.560899 | 10 |
TATACTG | 2045 | 0.0 | 9.447672 | 5 |
CCCACGA | 2075 | 0.0 | 9.445443 | 19 |
CTTATAC | 2535 | 0.0 | 9.333908 | 1 |
TAGACAG | 3275 | 0.0 | 9.191072 | 5 |
TATACAC | 3770 | 0.0 | 9.135357 | 3 |
TCTCCGA | 2165 | 0.0 | 8.988355 | 11 |
TAGACTG | 2485 | 0.0 | 8.788956 | 5 |
CACGAGA | 2250 | 0.0 | 8.711113 | 21 |
CTAGTAC | 1215 | 0.0 | 8.526823 | 3 |
TAGGACA | 2400 | 0.0 | 8.283428 | 4 |
TACACTG | 3280 | 0.0 | 8.280698 | 5 |
GTATAGA | 1830 | 0.0 | 8.262803 | 1 |
CTTAGAC | 1785 | 0.0 | 8.00007 | 3 |
ATACCGT | 550 | 0.0 | 7.8911533 | 6 |
GTATAGG | 1460 | 0.0 | 7.767602 | 1 |
TTAGGAC | 1995 | 0.0 | 7.719365 | 3 |