FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004946989

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004946989
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4022835
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCGATGGTTAGAA161290.4009361557210276No Hit
GTCGACCGATGCTCAA141880.352686600370137No Hit
CATTCAACTAGGCATG138460.34418513312129384No Hit
GGGGGGGGGGGGGGGG114370.28430199100882836No Hit
TGTAAGCTGTTGTGAC112470.27957895364835994No Hit
ACTGGGCACTTCTCGC112340.2792557984605384No Hit
GCTTTAGGAACTAGTC88480.21994439244960332No Hit
TAGTTGCGACATAGCT65370.16249734329148474No Hit
CATCAGTGATTCGCAA61390.15260382292587193No Hit
CAGGAGCCTCGTGCAC52580.13070384442812097No Hit
CAGGAGCCTTCCAATG48060.1194679871284803No Hit
TCCTTAAACAGGGAGG44430.1104444999608485No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)