FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004947003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16409080
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATCGACTTTCCATT488840.2979082312963311No Hit
GGGGGGGGGGGGGGGG409340.24945944562400818No Hit
ATTACCTACCGAGGAT185520.11305935494250745No Hit
GCTGGACACGCCCTGA184790.11261447930048486No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)