FastQCFastQC Report
Fri 9 Sep 2022
EGAF00004947012

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947012
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7062364
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG228570.3236451703707144No Hit
ACTGTCCACAGGTCCC131690.18646730754744445No Hit
CTGGTGGACGCGGTTC122840.1739360927870611No Hit
GTGGTTAACGGCCTGT108580.15374455352343774No Hit
AAGACAAACAGTACGG90980.12882371964968103No Hit
GTGTACTGACAGTCCG89100.12616172148589339No Hit
AGCTATCGACGGTTTA74670.10572946962235308No Hit
GGGTGAATGGACAAAT74170.10502149138730318No Hit
TGTCCCATGGCCAGCT72500.10265684408223648No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)