Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004947022 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4131968 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TGTAGATC | 4055829 | 98.15731874012576 | Illumina Single End PCR Primer 1 (100% over 8bp) |
TGTAGCTC | 24099 | 0.5832329776029244 | No Hit |
TGTAGATA | 13280 | 0.3213964870976736 | No Hit |
TGAAGATC | 6054 | 0.14651613952479786 | No Hit |
AGTAGATC | 5325 | 0.12887321489421022 | No Hit |
TGTAGAAC | 4682 | 0.11331162293609243 | Illumina DpnII expression Adapter 1 (100% over 8bp) |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)