FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004947023

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947023
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13681583
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGTTACA1347800798.51204352595748No Hit
ACGTTAAA292260.2136156320507649No Hit
ACGATACA235300.17198302272478266No Hit
ACATTACA227820.16651581911245214No Hit
ACGTAACA155060.11333483851978239No Hit
ACCTTACA147890.10809421687534256No Hit
ACGGTACA140870.10296323166697889No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)