FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004947081

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947081
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14478575
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG444960.3073230618344692No Hit
TTATCGACTTTCCATT441270.3047744684818775No Hit
AACTTACCTGAATCTC425380.2937996315245112No Hit
GCTGGACACGCCCTGA183430.12669064462490265No Hit
ATTACCTACCGAGGAT166540.11502513196222695No Hit
CATAGTCGACTACTCC145260.10032755295324297No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)