FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004947084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13533514
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG453830.3353378878538124No Hit
CCTAGCACTACAGGCA289000.2135439472704576No Hit
CGTTCTCGAATAACCC166240.12283579859598918No Hit
CATTCCTCTACGCGAA151480.11192954025096512No Hit
TCGATGATGTCCCGTT143510.1060404563072089No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)