FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004947130

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947130
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6429417
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG172900.2689201835874077No Hit
ACTGTCCACAGGTCCC115500.1796430376191185No Hit
CTGGTGGACGCGGTTC114150.17754331380279115No Hit
GTGGTTAACGGCCTGT97830.15215998588985594No Hit
AAGACAAACAGTACGG81940.1274454588961954No Hit
GTGTACTGACAGTCCG78330.12183064187623854No Hit
GGGTGAATGGACAAAT68420.10641711371342068No Hit
AGCTATCGACGGTTTA66620.10361748195831753No Hit
TGTCCCATGGCCAGCT65440.1017821678077499No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)