FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004947136

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947136
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5971821
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACGTTT582864297.60242311348581No Hit
GCACGTTA595880.9978195930521025No Hit
GCCCGTTT106780.17880643107018782No Hit
GCACGTAT103940.1740507627405443No Hit
GCACGGTT98040.1641710292388201No Hit
GCACGATT88490.14817925721484285No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)