FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004947187

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947187
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8248855
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG228580.277105125499236No Hit
ACTGTCCACAGGTCCC148540.1800734768643648No Hit
CTGGTGGACGCGGTTC142030.17218147245890492No Hit
GTGGTTAACGGCCTGT124130.15048149106754816No Hit
AAGACAAACAGTACGG105340.12770257205393962No Hit
GTGTACTGACAGTCCG102310.12402933498043062No Hit
GGGTGAATGGACAAAT86530.10489940725106697No Hit
AGCTATCGACGGTTTA85710.10390532989123945No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)