FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004947214

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947214
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6710966
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG172940.2576976250512966No Hit
CCTAGCACTACAGGCA141770.2112512565255136No Hit
CGTTCTCGAATAACCC78790.11740485646924749No Hit
CATTCCTCTACGCGAA74970.11171268040994396No Hit
TCGATGATGTCCCGTT72490.10801723626673118No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)