FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004947220

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947220
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5690829
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG153070.26897662888833945No Hit
ACTGTCCACAGGTCCC103080.1811335395950221No Hit
CTGGTGGACGCGGTTC102040.17930603783736956No Hit
GTGGTTAACGGCCTGT86380.15178807867887087No Hit
AAGACAAACAGTACGG72810.12794269516796236No Hit
GTGTACTGACAGTCCG71270.1252365867960538No Hit
TGTCCCATGGCCAGCT59920.10529221665244202No Hit
GGGTGAATGGACAAAT59770.10502863466816523No Hit
AGCTATCGACGGTTTA58690.1031308443813722No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)