FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004947252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5971821
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG185180.31008966946598027No Hit
ACTGTCCACAGGTCCC113600.19022673318574015No Hit
CTGGTGGACGCGGTTC108050.18093308556971147No Hit
GTGGTTAACGGCCTGT93050.15581511903990425No Hit
AAGACAAACAGTACGG77850.13036224628969958No Hit
GTGTACTGACAGTCCG75550.12651082475512915No Hit
GGGTGAATGGACAAAT66410.1112056104829666No Hit
TGTCCCATGGCCAGCT63020.10552895004723015No Hit
AGCTATCGACGGTTTA62170.10410559861054108No Hit
CATTCAACTCATCTTT60960.10207941597713663No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)