FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004947289

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947289
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14555333
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG366130.2515435407764288No Hit
CCTAGCACTACAGGCA313560.21542619464631965No Hit
CGTTCTCGAATAACCC167920.11536664946106008No Hit
CATTCCTCTACGCGAA164660.11312692055894566No Hit
TCGATGATGTCCCGTT162060.11134063370449854No Hit
AGCTGCTCTACGTAAA146560.10069161591837164No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)