FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004947320

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947320
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4586580
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGTACT447744297.62049282907962No Hit
ATCGTACA196440.4282929764661251No Hit
ATAGTACT140300.30589240785072974No Hit
ATCGAACT113080.24654535623492885No Hit
AACGTACT90650.1976418159064052No Hit
ATCCTACT62690.13668136171177653No Hit
ATCGTAAT62300.13583105494725917No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)