FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004947393

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947393
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15925539
Sequences flagged as poor quality0
Sequence length34
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGACTG19350.09.1141535
TAGACAG25900.08.7006735
TCTATAC13850.08.5900543
TATACTG19150.08.4053515
TACACCG8250.08.3132125
GTGTAGG27100.08.2138081
AGCGTCA19450.08.131783
GTATAGG12400.08.0159211
CTAAGAC20450.08.0079123
TAGTACC11900.07.88051464
ATACTGT26950.07.790396
TACACAG35800.07.58482275
TATACCG3352.2183303E-77.5206335
GTCTTAG21050.07.51524351
CTAGTAC10250.07.5104433
CTAGGAC22750.07.5059423
GTACCGT6350.07.4943156
CTAGCAC26100.07.45420033
TAGGACC17350.07.42194
TACACTG26700.07.3915345
Produced by FastQC (version 0.11.5)